Details for gene set HALLMARK_EPITHELIAL_MESENCHYMAL

Table: GSEA Results Summary

Dataset	T11b high vs low squamous_GSEA_Ranked
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION
Enrichment Score (ES)	0.66067773
Normalized Enrichment Score (NES)	3.8383126
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Spp1	13	4.054	0.0468	Yes
2	Cxcl5	16	3.974	0.0953	Yes
3	Ecm1	31	3.325	0.1329	Yes
4	Tnc	84	2.358	0.1490	Yes
5	Serpine1	89	2.295	0.1764	Yes
6	Lgals1	98	2.178	0.2012	Yes
7	Htra1	106	2.122	0.2257	Yes
8	Vim	112	2.054	0.2498	Yes
9	Emp3	115	2.020	0.2742	Yes
10	Igfbp3	124	1.955	0.2964	Yes
11	Tgfbi	151	1.825	0.3124	Yes
12	Gpc1	155	1.783	0.3337	Yes
13	Aplp1	161	1.747	0.3540	Yes
14	Gja1	186	1.653	0.3684	Yes
15	Col5a2	232	1.484	0.3755	Yes
16	Cxcl15	238	1.470	0.3924	Yes
17	Tnfrsf11b	275	1.380	0.4005	Yes
18	Pdlim4	279	1.375	0.4167	Yes
19	Pthlh	299	1.307	0.4281	Yes
20	Col4a1	301	1.304	0.4440	Yes
21	Slc6a8	315	1.227	0.4559	Yes
22	Itga5	320	1.212	0.4699	Yes
23	Crlf1	331	1.187	0.4820	Yes
24	Capg	343	1.160	0.4936	Yes
25	Col5a1	348	1.150	0.5068	Yes
26	Lox	352	1.139	0.5201	Yes
27	Fbln2	361	1.124	0.5320	Yes
28	Col3a1	383	1.092	0.5402	Yes
29	Col4a2	406	1.036	0.5476	Yes
30	Fbln5	408	1.035	0.5601	Yes
31	Plaur	426	1.012	0.5684	Yes
32	Efemp2	437	0.996	0.5782	Yes
33	Flna	471	0.946	0.5816	Yes
34	Gadd45a	473	0.944	0.5930	Yes
35	Col6a2	479	0.927	0.6032	Yes
36	Col1a1	483	0.921	0.6138	Yes
37	Fstl1	507	0.892	0.6191	Yes
38	Gadd45b	522	0.873	0.6264	Yes
39	Lama3	542	0.853	0.6322	Yes
40	Eln	549	0.845	0.6412	Yes
41	Cd44	562	0.834	0.6485	Yes
42	Fbn1	569	0.830	0.6572	Yes
43	Serpinh1	621	0.740	0.6537	Yes
44	Plod3	679	0.687	0.6480	Yes
45	Col1a2	729	0.645	0.6438	Yes
46	Timp3	754	0.625	0.6455	Yes
47	Acta2	759	0.621	0.6522	Yes
48	Pdgfrb	764	0.616	0.6588	Yes
49	Sparc	792	0.595	0.6594	Yes
50	Sat1	817	0.584	0.6607	Yes
51	Matn2	876	0.554	0.6531	No
52	Wipf1	888	0.546	0.6571	No
53	Bmp1	940	0.510	0.6507	No
54	Dab2	952	0.504	0.6542	No
55	Cdh11	1305	-0.556	0.5736	No
56	Col16a1	1544	-0.601	0.5219	No
57	Il15	1933	-0.681	0.4340	No
58	Fas	2311	-0.764	0.3498	No
59	Pvr	2314	-0.766	0.3587	No
60	Areg	2629	-0.856	0.2913	No
61	Pfn2	3511	-1.217	0.0875	No
62	Fmod	3707	-1.390	0.0562	No
63	Qsox1	3787	-1.486	0.0549	No
64	Pcolce	3854	-1.610	0.0584	No